Index of help files for keywords beginning with C

Keyword	Help documents
C, CORRL2, CORRL2	Simulation: SIMEPS Error Code
c, correlation_across_l2_records	Correlation Across L2 Records
calendar_date	DATE data item
call	CALL data item CALLFL Calling protocol phrase $ERROR Expectation block Initialization-Finalization block $INPUT $PK Simulation block
call_data_item	CALL data item
callfl	$AESINITIAL $BIND CALL data item CALLFL Calling protocol phrase $ERROR $PK Bind example Control3 example Control5 example Control6 example Control7 example TDM example
calling_protocol_phrase	$AESINITIAL CALL data item CALLFL Calling protocol phrase $ERROR $PK
CALPHA, CENTERING, CENTERING, CINTERVAL, CINTERVAL, CITER, CITER, CNSAMP, CNSAMP, CONDITIONAL, CONDITIONAL, CONSTRAIN, CONSTRAIN, Classical	$ESTIMATION record options
calpha, citer, citer	$ESTIMATION $ESTM Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 1 Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 7r Bayes Example 9
case	Abbreviated code $INPUT nmfe utility program variables in modules Verbatim code
CATEGORICAL, CATEGORICALLOGIT, CHISQUARE, cdf, cumulative	Probability Density Functions
categorical	Bayes Example 10 Bayes Example 10l Data_average example
CATEGORICAL, CATEGORICAL, CATEGORICALLOGIT, CHISQUARE, cdf, cumulative	Probability Density Functions
category, cid	$LEVEL
ccontr	CCONTR CELS $CONTR NONMEM error messages MIX CONTR: THETA Stubs $SUBROUTINES CCONTR example
CCONTR:_F	CCONTR CCONTR: F G H
ccontr:_f_g_h	CCONTR: F G H
CCONTR:_Y	CCONTR
CCONTR:_Y_DATA_N1_N2_DIM, ccontr:_y_data_n1_n2_dim, ccontr:_y_data_n1_n2_dim, cdata	CCONTR: Y DATA N1 N2 DIM
CCONTR:_Y_DATA_N1_N2_DIM, CCONTR:_Y_DATA_N1_N2_DIM, ccontr:_y_data_n1_n2_dim, cdata	CCONTR: Y DATA N1 N2 DIM
ccontr_example	CCONTR example
ccv, constant_coefficient_of_variation	Random models Multiple_dose example Phenobarb example
CCONTR:_Y_DATA_N1_N2_DIM, CCONTR:_Y_DATA_N1_N2_DIM, ccontr:_y_data_n1_n2_dim, ccontr:_y_data_n1_n2_dim, cdata	CCONTR: Y DATA N1 N2 DIM
cden_	NONMEM modules Nonparametric Density: DEN_ CDEN_ variables in modules Nonparametric example
cdf_l, cdf_la	NPD NPDE NPDE_MODE DV_LOQ CDF_L DV_LAQ_CDF_LA
cdlm, cfil, chfl, chn, control_stream, covariance_record, covt, cpar	NONMEM control stream
cels	CCONTR CELS NONMEM error messages
centered, centering, centering, cnsamp, cnsamp, constrain, constrain	$ESTIMATION $ESTM
CALPHA, CALPHA, CENTERING, CINTERVAL, CINTERVAL, CITER, CITER, CNSAMP, CNSAMP, CONDITIONAL, CONDITIONAL, CONSTRAIN, CONSTRAIN, Classical	$ESTIMATION record options
centered, centering, cnsamp, cnsamp, constrain, constrain	$ESTIMATION $ESTM
central_to_peripheral_rate	ADVAN11 ADVAN12 ADVAN3 ADVAN4
chain	$CHAIN $ESTIMATION $ESTM
characters	$INPUT
checkdata, checkout, comma, comment_record, csv	$DATA
checkmu	$ABBREVIATED MU_Model
chi_square	MINIMUM VALUE OF OBJ. FUNCTION
chol	CHOL
cholesky	CHOL $OMEGA $SIGMA
cholroff, compress, cross_product_gradient	$COVARIANCE $COVR
CALPHA, CALPHA, CENTERING, CENTERING, CINTERVAL, CITER, CITER, CNSAMP, CNSAMP, CONDITIONAL, CONDITIONAL, CONSTRAIN, CONSTRAIN, Classical	$ESTIMATION record options
cinterval	$ESTIMATION $ESTM Bayes Example 8
Cnnnnn, cipred, cires, ciwresi	$TABLE
circad.csv, circadian	Examples Using MTIME to Model Periodic Discontinuities in $DES
CALPHA, CALPHA, CENTERING, CENTERING, CINTERVAL, CINTERVAL, CITER, CNSAMP, CNSAMP, CONDITIONAL, CONDITIONAL, CONSTRAIN, CONSTRAIN, Classical	$ESTIMATION record options
calpha, calpha, citer	$ESTIMATION $ESTM Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 1 Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 7r Bayes Example 9
ciwres, cpred, cpredi, cres, cresi, cwres, cwresi	$SCATTERPLOT $TABLE
cl	$PK TRANS2 TRANS3 TRANS4
CALPHA, CALPHA, CENTERING, CENTERING, CINTERVAL, CINTERVAL, CITER, CITER, CNSAMP, CNSAMP, CONDITIONAL, CONDITIONAL, CONSTRAIN, CONSTRAIN, Classical	$ESTIMATION record options
clock_time	TIME data item
CLOCKSEED, CTYPE, CTYPE	$CHAIN $ESTIMATION record options
clockseed	$ESTIMATION $ESTM RANDMT RANDMTU $SIMULATION $TABLE
close	FILES Write print
clt, cnv, cor	additional_output_files $ESTIMATION $ESTM NONMEM output files
cm38	CONTR SPTWO
cmt	CMT PCMT data item Default compartment $INPUT
cmt_pcmt_data_item	CMT PCMT data item
cnpe	Displayed PRED-Defined Items COMACT COMSAV $NONPARAMETRIC Nonparametric Density: DEN_ CDEN_ Nonparametric example
CALPHA, CALPHA, CENTERING, CENTERING, CINTERVAL, CINTERVAL, CITER, CITER, CNSAMP, CONDITIONAL, CONDITIONAL, CONSTRAIN, CONSTRAIN, Classical	$ESTIMATION record options
centered, centering, centering, cnsamp, constrain, constrain	$ESTIMATION $ESTM
cnt	CONTR NWPRI $PRIOR PRIOR SPTWO TNPRI NWPRI examples TNPRI examples
cntid	additional_output_files NONMEM modules Objective Function Value Individual variables in modules Write print Objective Function Value Individual example
coi, cov	additional_output_files $ESTIMATION $ESTM NONMEM output files $RCOV $RCOVI
colon	II data item TIME data item
com(n)	Abbreviated code COM COMACT COMSAV COMRES Copying block PRED-Defined Variables $TABLE
com_comact_comsav_comres	COM COMACT COMSAV COMRES
comact	$ABBREVIATED COM COMACT COMSAV COMRES Copying block Displayed PRED-Defined Items COMACT COMSAV NONMEM modules DES AES: ISFINL $TABLE variables in modules
comact_comsav	COMACT COMSAV
combined_additive_and_ccv	Random models Exogenous supplementation example
commitqq	FLU
common	NONMEM modules
commons	Finalization example ($PRED and $INFN)
comp	$MODEL
compact	$ABBREVIATED DES DES AES: ICALL IDEFD IDEFA
compartment	CMT PCMT data item Default compartment $MODEL MODEL
compartment_amount	$AES $AESINITIAL $DES $ERROR ERROR PK State Vector: A State Vector Time: TSTATE Initial Steady State example
compartment_initialization	ADVAN6 ADVAN8 ADVAN13 ADVAN14 ADVAN16 ADVAN18 ADVAN9_15 Compartment Initialization Block MODEL $PK PK Compartment Initialization: A_0 Initial Steady State: I_SS ISSMOD Compartment Initialization: A_0FLG Initial Steady State example
compartment_initialization:_a_0	Compartment Initialization: A_0
compartment_initialization:_a_0flg	Compartment Initialization: A_0FLG
compartment_initialization_block	Compartment Initialization Block
compartment_number	$PK
compartment_scale	$PK PK Scaling parameter
compartment_update, compartment_update_block_(nm75)	Compartment Update Block (NM75)
computername.exe, control_stream.log, core	parallel computing
comres	Abbreviated code $ABBREVIATED COM COMACT COMSAV COMRES Copying block PRED-Defined Variables
comsav	$ABBREVIATED COM COMACT COMSAV COMRES Copying block Displayed PRED-Defined Items COMACT COMSAV NONMEM modules variables in modules
concomitant	$BIND $INPUT $PK
CALPHA, CALPHA, CENTERING, CENTERING, CINTERVAL, CINTERVAL, CITER, CITER, CNSAMP, CNSAMP, CONDITIONAL, CONSTRAIN, CONSTRAIN, Classical	$ESTIMATION record options
conditional	$COVARIANCE $COVR $ESTIMATION $ESTM $NONPARAMETRIC $SCATTERPLOT $TABLE
conditional_contribution	CCONTR CELS
conditional_estimate	HESSIAN
conditional_estimation_method	$ESTIMATION $ESTM GETETA
conditional_statement	Abbreviated code Compartment Initialization Block Data_Average block Expectation block Indicator variables Initialization-Finalization block Simulation block
conditional_value	Displayed PRED-Defined Items
confidence_interval	INFERENTIAL STATISTICS
constant	$ABBREVIATED
CALPHA, CALPHA, CENTERING, CENTERING, CINTERVAL, CINTERVAL, CITER, CITER, CNSAMP, CNSAMP, CONDITIONAL, CONDITIONAL, CONSTRAIN, Classical	$ESTIMATION record options
centered, centering, centering, cnsamp, cnsamp, constrain	$ESTIMATION $ESTM
constrained	INITIAL ESTIMATE (INITIAL EST) MONITORING OF SEARCH $OMEGA $SIGMA $THETA Interoccasion_variability example
constraint	Aneal $ANNEAL CONSTRAINT $ESTIMATION $ESTM INITIAL ESTIMATE (INITIAL EST) MONITORING OF SEARCH $OMEGA $SIGMA $THETA Interoccasion_variability example
cont	CONT data item $INPUT
cont_data_item	CONT data item
continuation	Abbreviated code CONT data item $INPUT nmfe utility program
contr	CCONTR $CONTR CONTR ELS $MIX MIX MIX CONTR: THETA CONTR: KCALL CONTR: Y DATA NOBS CCONTR: Y DATA N1 N2 DIM Stubs $SUBROUTINES CCONTR example
CONTR:_F_G_H, contr:_f_g_h, contr:_f_g_h	CONTR: F G H
CONTR:_F_G_H, CONTR:_F_G_H, contr:_f_g_h	CONTR: F G H
CONTR:_III_DIM, contr:_iii_dim, contr:_iii_dim	CONTR: III DIM
CONTR:_III_DIM, CONTR:_III_DIM, contr:_iii_dim	CONTR: III DIM
contr:_kcall	CONTR: KCALL
CONTR:_Y_DATA_NOBS, contr:_y_data_nobs, contr:_y_data_nobs	CONTR: Y DATA NOBS
CONTR:_Y_DATA_NOBS, CONTR:_Y_DATA_NOBS, contr:_y_data_nobs	CONTR: Y DATA NOBS
contribution	CCONTR CELS CONTR CRIT HESSIAN MULT SPTWO
control3_example	Control3 example
control4_example	Control4 example
control5	Finedata example Infn_interpolation example 1 Infn_interpolation example 2
control5_example	Control5 example
control6_example	Control6 example
control7_example	Control7 example
copying_block	Copying block
copying_pass	COM COMACT COMSAV COMRES COMACT COMSAV
correlation	CORRELATION MATRIX OF ESTIMATE $COVARIANCE $COVR INFERENTIAL STATISTICS $OMEGA $SIGMA BIVARIATE FUNCTION
c, c, correlation_across_l2_records	Correlation Across L2 Records
correlation_matrix, covariance_matrix	FINAL PARAMETER ESTIMATE
correlation_matrix_of_estimate	CORRELATION MATRIX OF ESTIMATE Order_option SUPP
C, C, CORRL2	Simulation: SIMEPS Error Code
corrl2	Correlation Across L2 Records NONMEM modules variables in modules
cos, cosine	Abbreviated code
COV_STEP	TOL
covariance	additional_output_files CORRELATION MATRIX OF ESTIMATE $COVARIANCE $COVR COVARIANCE MATRIX OF ESTIMATE Recursive PRED Indicator $OMEGA Order_option raw_output_file $SIGMA Variance-covariance Phenobarb example
covariance_matrix_of_estimate	COVARIANCE MATRIX OF ESTIMATE Order_option SUPP
covariance_step	NONMEM steps parallel computing
covariate	Interoccasion_variability example Simulation_2 example Simulation_3 example
covr	$COVARIANCE $COVR NONMEM control stream Phenobarb example
cp	Indicator variables $INPUT Control5 example PK_PD_simultaneous_1 example
cpe	Displayed PRED-Defined Items $ESTIMATION $ESTM $NONPARAMETRIC
cpred_, cpredi_, cres_, cresi_, cwres_, cwresi_	NONMEM modules variables in modules
cpu	additional_output_files NONMEM output files parallel computing
CPUT	NONMEM output files
crit	CELS CRIT Stubs $SUBROUTINES
ctlo, ctup	CTLO CTUP NONMEM modules CTLO CTUP Probability: PR_CT variables in modules
ctlo_ctup_probability:_pr_ct	CTLO CTUP Probability: PR_CT
ctlr-e, ctrl-k, ctrl_j	nmfe utility program parallel computing
ctrl	nmfe utility program parallel computing SIGNAL
ctrl-t	nmfe utility program
CLOCKSEED, CLOCKSEED, CTYPE	$CHAIN $ESTIMATION record options
ctype	$ESTIMATION $ESTM Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 1 Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6sb Bayes Example 6s Bayes Example 7r Bayes Example 8 Bayes Example 9
cumulative_density	Nonparametric Density: DEN_ CDEN_
cumulative_distribution	NPD NPDE NPDE_MODE DV_LOQ CDF_L DV_LAQ_CDF_LA PHI

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